St. Andrews MacTutor History of Mathematics, a good starting place.
http://www-history.mcs.st-and.ac.uk/history/
David Joyce's History of Mathematics Web Sites, which includes a link to the full text of Euclid's "Elements"
http://aleph0.clarku.edu/~djoyce/mathhist/webresources.html
Kevin Brown's History of Mathematics Pages
http://www.seanet.com/~ksbrown/ihistory.htm
Earliest Known Uses of Some of the Words of Mathematics
http://members.aol.com/jeff570/mathword.html
David Calvis's History of Mathematics Web Sites, more good links
http://www2.bw.edu/~dcalvis/history.html
Brief biographies
http://www.allmath.com/biography.asp
Trinity College, Dublin, History of Mathematics archive
http://www.maths.tcd.ie/pub/HistMath/HistMath.html
Mathematical Journey Through Time, a student project
http://nunic.nu.edu/~frosamon/history/math.html
The Perseus Project, Tufts University
http://www/perseus.tufts.edu/Texts/chunk.TOC.html
Historia Mathematica, an international journal of scholarship in the history of mathematics. The website has many useful links.
http://www.chass.utoronto.ca/hm/
British Society for the History of Mathematics, a lively organization. Again, many useful links.